Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924203.1_cds_XP_016472579.1_64801
CDS Infomation

[gene=LOC107794593] [db_xref=GeneID:107794593] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016472579.1] [location=complement(join(185493..186317,187087..187554))] [gbkey=CDS]
Sequence

ATGAATTTGATACAGAAATCTCTTTTCTCAATCCTAAAATCCATAGCCACCCAACAGTTT
GCATCCCATAGTCACAACCTTCAGCAACACAGAACCATAGTAAAAGTCCGTTTAAAATGG
GTGAAAAACAGAGGTTTGGACCACATAATCGATGTTCAAACGGATCTTAAAGCAGCTTGT
TTATTAAAAGAAGCTATTGTGCGTTCACCAGTTGGTTATCTAACTGCTAAGTCACTTGCT
GACTCACAAAAGATTCTTGGACTTACAGTTCCTACACTTAGGTTTATTAGAAGATATCCA
ACTCTTTTTGAAGAGTTTCCTCACCCAAAGTACCCTTCTTTGCCTTGTTTTAAACTTACC
CATATTGCTAAAATTCTTCATGATCAAGAACTGAAGCTCTTACATGATAACCCGACTGAT
TTGGTTCAAAGGCTTTCCAAAGTTCTTATGATGACAACTAACAGAATGGTTGCGCTGCAG
TCGTTACATCCTTTGAAATGGGATTTAGGATTGCCCGATGATTTTGATAAGAATTTAATT
AAGAAATTTCCTGATCATTTTAGGATAGTTAAGGGAACGAATGGATTGGCTTGCTTAAAA
CTTGTTCAATGGCCAGAAGAATATGGTGTCTCCGAGTTGCAAAAGATGAATGAGAAGAGC
ACAATAGACGATGACAGCCCTCCTGGGTATAGAGAATTTAAAAGGGGCAAAGCTGCATTA
GAATTCCCAATGAGTTTCCCAAGGGGATACGGGGCACAGAAGAAGGTCAAAGCGTGGATG
GATGAGTTTCAGAAGCTGCCTTACATCTCACCTTATGAGGATTCAAGGGGAATCGACCCC
GATAGTGATCTTATGGAAAAGAGAATAGTTGGGGTTTTACATGAGTTTCTAAGCTTGACA
CTATACAAGAAAACAAAGAGAAATTACTTGAGGAGCTTGAGAGAGGAACTAAATCTTCCA
CATAGATTTACTCGAATATTTACAAGGTATCCAGGAATATTCTACCTCTCATTGAAGTGC
AAGACAACGACTGTGGCGTTGAGAGAGGGGTACCGTCGTGGAAGACTTGTAAATCCGCGT
CCTCTGACTCGCCACAGAGATAAGTTTCATCATGTTATGAGGACAGGGTTAATTTATCGA
AGCAAAGGAATAGACATTTTGCCGCAGCTGGACAATGTAGTTGATGAAGAGGATACAGGA
GAAGAAGAGAGTGATGAAGAAGAGATCGAAATGAATGATGAATGCTACGCAGATGGATCT
TCAGATGCAGACACAGGTGGTGATGAAGGCTAG

Peptide Sequence

PEP ID

XP_016472579.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MNLIQKSLFSILKSIATQQFASHSHNLQQHRTIVKVRLKWVKNRGLDHIIDVQTDLKAAC
LLKEAIVRSPVGYLTAKSLADSQKILGLTVPTLRFIRRYPTLFEEFPHPKYPSLPCFKLT
HIAKILHDQELKLLHDNPTDLVQRLSKVLMMTTNRMVALQSLHPLKWDLGLPDDFDKNLI
KKFPDHFRIVKGTNGLACLKLVQWPEEYGVSELQKMNEKSTIDDDSPPGYREFKRGKAAL
EFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYEDSRGIDPDSDLMEKRIVGVLHEFLSLT
LYKKTKRNYLRSLREELNLPHRFTRIFTRYPGIFYLSLKCKTTTVALREGYRRGRLVNPR
PLTRHRDKFHHVMRTGLIYRSKGIDILPQLDNVVDEEDTGEEESDEEEIEMNDECYADGS
SDADTGGDEG

Transcript Sequence

Gene sequence data has not been registered.